evoSigs

Select the evolutionary steps from ASCETIC analysis that are significantly associated with survival data.

evoSigs(survivalData, evolutionarySteps)

Arguments

survivalData

Survival data. Notice that no missing values are allowed.

evolutionarySteps

Evolutionary steps per patient as inferred by ASCETIC.

Value

A list of 3 elements: 1) survivalAnalysis, results from survival analysis. 2) evolutionarySteps, evolutionary steps significantly associated with survival data. 3) clustersPrevalence, prevalence per cluster of the selected evolutionary steps.

Examples

set.seed(12345)
data(amlExample)
resExampleEvosigs <- evoSigs( survivalData = amlExample$survival_data,
                             evolutionarySteps = amlExample$evolutionary_steps )