groupsCNPlot — groupsCNPlot • RESOLVE

Plot observed Copy Number (CN) counts for different groups of patients.

groupsCNPlot(counts, groups, normalize = TRUE, xlabels = FALSE)

Arguments

counts: Matrix with Copy Number (CN) counts data.
groups: List where names are groups labels and elements are patients labels corresponding to rownames in counts.
normalize: Boolean value; shall I normalize observed counts?
xlabels: Boolean value; shall I display x labels?

Value

A ggplot2 object.

Examples

data(plot_data_examples)
counts <- plot_data_examples[['groups.CN.plot']][['counts']]
groups <- plot_data_examples[['groups.CN.plot']][['groups']]
groupsCNPlot(counts=counts,groups=groups)