patientsIDPlot — patientsIDPlot • RESOLVE

Plot Small Insertions and Deletions (ID) counts for a set of given patients.

patientsIDPlot(
  id_data_counts,
  samples = rownames(id_data_counts),
  freq = FALSE,
  xlabels = FALSE
)

Arguments

id_data_counts: Small Insertions and Deletions counts matrix.
samples: Name of the samples. This should match a rownames in id_data_counts
freq: Boolean value; shall I display rates instead of counts?
xlabels: Boolean value; shall I display x labels?

Value

A ggplot2 object.

Examples

data(plot_data_examples)
counts <- plot_data_examples[['patients.ID.plot']][['counts']]
patientsIDPlot(id_data_counts=counts,samples=rownames(counts)[seq_len(2)])