patients.plot — patients.plot • SparseSignatures

Plot trinucleotides counts for a set of given patients.

patients.plot(
  trinucleotides_counts,
  samples = rownames(trinucleotides_counts),
  freq = FALSE,
  xlabels = FALSE
)

Arguments

trinucleotides_counts: trinucleotides counts matrix.
samples: name of the samples. This should match a rownames in trinucleotides_counts.
freq: boolean value; shall I display rates instead of counts?
xlabels: boolean value; shall I display x labels?

A ggplot2 object.

data(patients)
patients.plot(trinucleotides_counts=patients,samples=c("PD10010a","PD10011a","PD10014a"))