All functions

combine.query.results()

combine.query.results

combine.single.matrix()

combine.single.matrix

compute.frequencies.scores()

compute.frequencies.scores

compute.oncoscore()

compute.oncoscore

compute.oncoscore.from.region()

compute.oncoscore.from.region

compute.oncoscore.timeseries()

compute.oncoscore.timeseries

estimate.oncogenes()

estimate.oncogenes

genes

A list of genes

get.genes.from.biomart()

get.genes.from.biomart

get.list.from.xml()

get.list.from.xml

get.pubmed.driver.analysis()

get.pubmed.driver.analysis

perform.query()

perform.query

perform.query.from.region()

perform.query.from.region

perform.query.timeseries()

perform.query.timeseries

plot(<oncoscore>)

plot.oncoscore

plot(<oncoscore.timeseries>)

plot.oncoscore.timeseries

query

The result of perform.web.query on genes

query.timepoints

The result of perform.time.series.query on genes and timepoints

timepoints

A list of timepoints

try.scan()

try.scan